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De novo whole genome sequencing and BAC sequencing
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A Sanger/pyrosequencing hybrid approach for the generation of high-quality draft assemblies of marine microbial genomes |
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Goldberg SM, Johnson J, Busam D, Feldblyum T, Ferriera S, Friedman R, Halpern A, Khouri H, Kravitz SA, Lauro FM, Li K, Rogers YH, Strausberg R, Sutton G, Tallon L, Thomas T, Venter E, Frazier M, Venter JC. Proc Natl Acad Sci U S A. 2006 Jul 25;103(30):11240-5. Epub 2006 Jul 13 |
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Unique Features of a Highly Pathogenic Campylobacter jejuni Strain |
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Dirk Hofreuter, Jennifer Tsai, Robert O. Watson, Veronica Novik, Bill Altman, Michelle Benitez, Christina Clark, Clotilde Perbost, Thomas Jarvie, Lei Du, and Jorge E. Galán Infection and Immunity, August 2006, p. 4694-4707, Vol. 74, No. 8 |
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The complete genome sequence of a chronic atrophic gastritis Helicobacter pylori strain: Evolution during disease progression |
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Jung D. Oh, Helene Kling-Backhed, Marios Giannakis, Jian Xu, Robert S. Fulton, Lucinda A. Fulton, Holland S. Cordum, Chunyan Wang, Glendoria Elliott, Jennifer Edwards, Elaine R. Mardis, Lars G. Engstrand, and Jeffrey I. Gordon PNAS June 27, 2006, vol. 103, no. 26, 9999–10004 |
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New insights into Acinetobacter baumannii pathogenesis revealed by high-density pyrosequencing and transposon mutagenesis |
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Michael G. Smith, Tara A. Gianoulis, Stefan Pukatzki, John J. Mekalanos, L. Nicholas Ornston, Mark Gerstein, and Michael Snyder Genes & Development, March 7, 2007, Vol. 21, p 601–614 |
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Mechanism of chimera formation during the Multiple Displacement Amplification |
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Roger S Lasken and Timothy B Stockwell BMC Biotechnology 2007, 7:19 doi:10.1186/1472-6750-7-19 |
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The capsule polysaccharide structure and biogenesis for non-O1 Vibrio cholerae NRT36S: genes are embedded in the LPS region |
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Yuansha Chen,1 Peter Bystricky,2,6 Jacob Adeyeye,2,7 Pinaki Panigrahi,3 Afsar Ali,1 Judith A Johnson,4,5 CA Bush,2 JG Morris, Jr,1 and OC Stine1 BMC Microbiology |
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Comparative Genomic Analyses of Seventeen Streptococcus pneumoniae Strains: Insights into the Pneumococcal Supragenome |
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Hiller NL, Janto B, Hogg JS, Boissy R, Yu S, Powell E, Keefe R, Ehrlich NE, Shen K, Hayes J, Barbadora K, Klimke W, Dernovoy D, Tatusova T, Parkhill J, Bentley SD, Post JC, Ehrlich GD, Hu FZ Journal of Bacteriology |
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Insights into the Genome of Large Sulfur Bacteria Revealed by Analysis of Single Filaments |
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Mußmann M, Hu FZ, Richter M, de Beer D, Preisler A, Jørgensen BB, Huntemann M, Glöckner FO, Amann R, Koopman WJ, Lasken RS, Janto B, Hogg J, Stoodley P, Boissy R, Ehrlich GD PLoS Biol. 2007 September; 5(9): e230 |
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The complete genome sequence of Campylobacter jejuni strain 81116 (NCTC11828) |
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Pearson BM, Gaskin DJ, Segers RP, Wells JM, Nuijten PJ, van Vliet AH. Journal of Bacteriology 2007 Sep 14; [Epub ahead of print] |
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Nanoliter Reactors Improve Multiple Displacement Amplification of Genomes from Single Cells |
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Marcy Y, Ishoey T, Lasken RS, Stockwell TB, Walenz BP, Halpern AL, Beeson KY, Goldberg SM, Quake SR. PLoS Genet 3(9): e155 doi:10.1371/journal.pgen.0030155 |
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Vibrio furnissii M1: Genomic and Biochemical Studies Demonstrating the Absence of an Alkane-Producing Phenotype |
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Lawrence P. Wackett, Janice A. Frias, Jennifer L. Seffernick, David J. Sukovich, and Stephan Cameron Appl. Environ. Microbiol. October 5, 2007. doi:10.1128/AEM.01785-07 |
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Rapid and accurate pyrosequencing of angiosperm plastid genomes |
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Michael J. Moore1, Amit Dhingra , Pamela S. Soltis, Regina Shaw, William G. Farmerie, Kevin M. Folta, and Douglas E. Soltis BMC Plant Biology 2006, 6:17 |
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454 sequencing put to the test using the complex genome of barley |
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Thomas Wicker, Edith Schlagenhauf, Andreas Graner, Timothy J. Close, Beat Keller, and Nils Stein BMC Genomics 2006, 7:275 doi:10.1186/1471-2164-7-275 |
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